BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022B10SP1|AL427865
(1113 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1585 2144 0.0
3x_Contig1560 168 2e-41
3x_Contig1790 164 4e-40
3x_Contig1806 152 2e-36
3x_Contig1805 112 2e-24
3x_Contig1701 104 4e-22
>3x_Contig1585
Length = 11490
Score = 2144 bits (1073), Expect = 0.0
Identities = 1095/1109 (98%), Gaps = 1/1109 (0%)
Strand = Plus / Plus
Query: 1 acttctttcactaggataaatacttttcacaacgacgagaaaactatttgagtcaaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 acttctttcactaggataaatacttttcacaacgacgagaaaactatttgagtcaaagaa 1109
Query: 61 aataagtggtgctgttttaccgatttcaatctgcaccttttctcaaaccgttatattaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 aataagtggtgctgttttaccgatttcaatctgcaccttttctcaaaccgttatattaac 1169
Query: 121 aaaaatatatactaatattctttaaattatatgtaacagtactttacctttttactattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 aaaaatatatactaatattctttaaattatatgtaacagtactttacctttttactattg 1229
Query: 181 tataataamatttgttggattggataatatccagagttggtagtaaggacttggataact 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 tataataaaatttgttggattggataatatccagagttggtagtaaggacttggataact 1289
Query: 241 ggatgccacctaagatttaagatgcaaatataamagtmagacaagatatatatggtcctg 300
||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 1290 ggatgccacctaagatttaagatgcaaatataaaagtaagacaagatatatatggtcctg 1349
Query: 301 cgaaatgaaattaaagatatacggacatggtactcctggtattgtaggtgcttttctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 cgaaatgaaattaaagatatacggacatggtactcctggtattgtaggtgcttttctaag 1409
Query: 361 gcgccagtyatcgaaccaatgctaaatmagamgccgaagctgagaggaactaggatcaag 420
|||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1410 gcgccagttatcgaaccaatgctaaataagaagccgaagctgagaggaactaggatcaag 1469
Query: 421 gctacagagtttggtgcttggmaaaccaatctaaaaagtatatmagtmgaaggtttcttc 480
||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||
Sbjct: 1470 gctacagagtttggtgcttggaaaaccaatctaaaaagtatataagtagaaggtttcttc 1529
Query: 481 atccaattttcccatctggattcggttacacattaattattgttctacattaacttatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 atccaattttcccatctggattcggttacacattaattattgttctacattaacttatgt 1589
Query: 541 cagatagaagamactaaggagaacaccgtaagtcatttacttaatcaatcgaagttagta 600
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1590 cagatagaagaaactaaggagaacaccgtaagtaatttacttaatcaatcgaagttagta 1649
Query: 601 tacccatcaccaatttmattatccattaattcatcataaacttcaagtcaaatggtatcc 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 tacccatcaccaatttaattatccattaattcatcataaacttcaagtcaaatggtatcc 1709
Query: 661 attcacatgaataccactaaccctctgggccaaacccctactaccaaacatgatgaatat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1710 attcacatgaataccactaaccctctgggccaaacccctactaccaaacatgatgaatat 1769
Query: 721 tcagttaaacatgacaaaatatagatcaagtttgctaattccaaccgggcatccatacca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1770 tcagttaaacatgacaaaatatagatcaagtttgctaattccaaccgggcatccatacca 1829
Query: 781 tgaatgtgtgcttcttggagacatcaactcataaccgatacggcacgcgatttaatatgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1830 tgaatgtgtgcttcttggagacatcaactcataaccgatacggcacgcgatttaatatgt 1889
Query: 841 gtcaaaggttaaaatcgtacataaggtgggataaaatccaacagggactttcaatgccaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1890 gtcaaaggttaaaatcgtacataaggtgggataaaatccaacagggactttcaatgccaa 1949
Query: 901 gaaactccttgaacctaaaagccctgcacatttgttgtcttgttaatatcctgattactc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1950 gaaactccttgaacctaaaagccctgcacatttgttgtcttgttaatatcctgattactc 2009
Query: 961 ttcatgtaaatggcattgacatacttcttaggtacagtcacactgttagggtcaagcgct 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2010 ttcatgtaaatggcattgacatacttcttaggtacagtcacactgttagggtcaagcgct 2069
Query: 1021 ccaagaataacaatttgttgtcaga-cmcaagtaatagaaatttggcaatatttataaaa 1079
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 2070 ccaagaataacaatttgttgtcagaccacaagtaatagaaatttggcaatatttataaaa 2129
Query: 1080 gcctgtttgatcatgaatgagttgtccgg 1108
|||||||||||||||||||||||||||||
Sbjct: 2130 gcctgtttgatcatgaatgagttgtccgg 2158
>3x_Contig1560
Length = 9209
Score = 168 bits (84), Expect = 2e-41
Identities = 185/221 (83%), Gaps = 2/221 (0%)
Strand = Plus / Minus
Query: 407 gaactaggatcaaggctacagagtttggtgcttggmaaaccaatctaaaaagtatatmag 466
||||||||||||||||||||| ||||| || |||| | |||||||||||||||||| |
Sbjct: 2402 gaactaggatcaaggctacagcgtttgatgattggaagcccaatctaaaaagtatataac 2343
Query: 467 tmgaaggtttcttcatccaattttcccatctggattcggttacacattaattattgttct 526
| |||||||||||||||| || ||||| |||||||| | ||| | |||| |||||||
Sbjct: 2342 tagaaggtttcttcatcctatcttcccctctggatttgacgacatactaatatttgttct 2283
Query: 527 acattaact--tatgtcagatagaagamactaaggagaacaccgtaagtcatttacttaa 584
||||||| | |||||||||| |||| || |||||||||||||||||| ||||||||||
Sbjct: 2282 acattaagttatatgtcagatgtaagaaaccaaggagaacaccgtaagtaatttacttaa 2223
Query: 585 tcaatcgaagttagtatacccatcaccaatttmattatcca 625
| | |||||||| |||| || | ||||||||| | ||||||
Sbjct: 2222 ttagtcgaagtttgtatgccgagcaccaatttaactatcca 2182
>3x_Contig1790
Length = 27369
Score = 164 bits (82), Expect = 4e-40
Identities = 150/173 (86%), Gaps = 3/173 (1%)
Strand = Plus / Plus
Query: 415 atcaaggctacagagtttggtgcttggmaaaccaatctaaaaagtatatmagtmgaaggt 474
||||||||||||| |||||||| ||| | ||||||| |||||||||| ||| || |||
Sbjct: 5003 atcaaggctacagtgtttggtgattgaaagcccaatctgaaaagtatataagtagatggt 5062
Query: 475 ttcttcatccaattttcccatctggattcggttacacattaattattgttctacattaac 534
|||||||||||||||| ||||||||||| | | ||| |||||||||||||||||||||||
Sbjct: 5063 ttcttcatccaatttttccatctggatttgatgacatattaattattgttctacattaac 5122
Query: 535 t--tatgtcagatagaagamactaaggagaacaccgtaagtcatttacttaat 585
| |||||||||| |||| || ||||||| |||||||||| |||||||||||
Sbjct: 5123 ttgtatgtcagatgtaagaaac-aaggagagcaccgtaagtaatttacttaat 5174
>3x_Contig1806
Length = 53694
Score = 152 bits (76), Expect = 2e-36
Identities = 280/349 (80%), Gaps = 7/349 (2%)
Strand = Plus / Minus
Query: 342 ttgtaggtgcttttctaaggcgccagtyatcgaaccaatgctaaatmagamgccgaagct 401
||||||| || |||||||||||||||| || |||||||||||| || ||| | |||| |
Sbjct: 41689 ttgtaggagcatttctaaggcgccagttattgaaccaatgctagataagaagttgaagtt 41630
Query: 402 gagaggaactaggatcaaggctacagagtttggtgcttggmaaaccaatctaaaaagtat 461
||| | ||||| |||| ||||||||| ||||| || | | | ||||||| |||||||||
Sbjct: 41629 gagtgcaactatgatcgaggctacagcgtttgatgaatcgaagaccaatccaaaaagtat 41570
Query: 462 atmagtmgaaggtttcttcatccaattttcccatctggattcggttacacattaattatt 521
| || ||||||||||||| ||||||||| |||||||| ||| |||| |||||
Sbjct: 41569 acagccagagtgtttcttcatccagttttcccatttggattcg---acatattagttatt 41513
Query: 522 gttctacattaacttat--gtcagatagaagamactaaggagaacaccgtaagtcattta 579
|||||||||| ||||| ||||||| |||| || |||||||||||||||||| |||||
Sbjct: 41512 gttctacattggcttatatgtcagatgtaagaaaccaaggagaacaccgtaagtaattta 41453
Query: 580 cttaatcaatcgaagttagtatacccatcaccaatttmattatcca-ttaattcatcata 638
||||| | |||||||| | ||||| || ||||||| | ||||| ||| ||||| |
Sbjct: 41452 cttaactagtcgaagttcgcataccgattaccaattgaaccatccatttatttcattaac 41393
Query: 639 aacttcaagtc-aaatggtatccattcacatgaataccactaaccctct 686
|||| ||| || ||||||||||||| ||||||||| |||||||||||
Sbjct: 41392 aactacaactcaaaatggtatccatctgcatgaatactactaaccctct 41344
>3x_Contig1805
Length = 19369
Score = 112 bits (56), Expect = 2e-24
Identities = 93/108 (86%)
Strand = Plus / Minus
Query: 354 ttctaaggcgccagtyatcgaaccaatgctaaatmagamgccgaagctgagaggaactag 413
||||||||||||||| || |||||||||||| || ||| | |||||||||| |||||||
Sbjct: 151 ttctaaggcgccagttattgaaccaatgctagataagaatctgaagctgagacgaactag 92
Query: 414 gatcaaggctacagagtttggtgcttggmaaaccaatctaaaaagtat 461
|||||||||||||| ||||||| |||| | ||||||| ||||||||
Sbjct: 91 gatcaaggctacagcttttggtgattggaagcccaatctgaaaagtat 44
>3x_Contig1701
Length = 10926
Score = 104 bits (52), Expect = 4e-22
Identities = 67/74 (90%)
Strand = Plus / Minus
Query: 354 ttctaaggcgccagtyatcgaaccaatgctaaatmagamgccgaagctgagaggaactag 413
||||||||||||||| || ||| ||||||||||| ||| || |||||||||| |||||||
Sbjct: 5354 ttctaaggcgccagttattgaaacaatgctaaataagaagctgaagctgagacgaactag 5295
Query: 414 gatcaaggctacag 427
||||||||||||||
Sbjct: 5294 gatcaaggctacag 5281
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7672
Number of Sequences: 1807
Number of extensions: 7672
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 6
length of query: 1113
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1097
effective length of database: 10,329,639
effective search space: 11331613983
effective search space used: 11331613983
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)